Merge pull request #98 from opencultureconsulting/felixlohmeier/import-csv-tsv-options-83
Felixlohmeier/import-csv-tsv-options-83
This commit is contained in:
Felix Lohmeier
GitHub
commit
40571d1e38
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@ -10,7 +10,7 @@ Bash script to control OpenRefine via [its HTTP API](https://docs.openrefine.org
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* allows execution of arbitrary bash scripts
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* interactive mode for playing around and debugging
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* your existing OpenRefine data will not be touched
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* import CSV, ~~TSV, line-based TXT, fixed-width TXT, JSON or XML~~ (and specify input options)
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* import CSV, TSV, ~~line-based TXT, fixed-width TXT, JSON or XML~~ (and specify input options)
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* supports stdin, multiple files and URLs
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* transform data by providing an [undo/redo](https://docs.openrefine.org/manual/running#history-undoredo) JSON file
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* orcli calls specific endpoints for each operation to provide improved error handling and logging
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170
src/bashly.yml
170
src/bashly.yml
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@ -19,6 +19,7 @@ examples:
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- orcli transform "duplicates" "https://git.io/fj5ju"
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- orcli export tsv "duplicates"
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- orcli export tsv "duplicates" --output "duplicates.tsv"
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- orcli delete "duplicates"
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- orcli run --interactive
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- |-
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orcli run << EOF
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@ -36,19 +37,23 @@ commands:
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- name: delete
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help: delete OpenRefine project
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args:
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- name: project
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- &project
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name: project
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help: project name or id
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required: true
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flags:
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- long: --force
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short: -f
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help: delete all projects with the same name
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- long: --quiet
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- &quiet
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long: --quiet
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short: -q
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help: suppress log output, print errors only
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examples:
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- orcli delete "duplicates"
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- orcli delete "duplicates" --force
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- orcli delete 1234567890123
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- for p in $(orcli list); do orcli delete ${p:0:13}; done
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- name: import
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help: commands to create OpenRefine projects from files or URLs
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@ -57,68 +62,137 @@ commands:
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- name: csv
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help: import character-separated values (CSV)
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args:
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- name: file
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- &file
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name: file
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help: Path to one or more files or URLs. When FILE is -, read standard input.
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default: "-"
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repeatable: true
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flags:
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- long: --separator
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- &separator
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long: --separator
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help: character(s) that separates columns
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arg: separator
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default: ","
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- long: --encoding
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- &blankCellsAsStrings
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long: --blankCellsAsStrings
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help: store blank cells as empty strings instead of nulls
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- &columnNames
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long: --columnNames
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help: |-
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set column names (comma separated)
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hint: add --ignoreLines 1 to overwrite existing header row
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arg: columnNames
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conflicts: [--headerLines]
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- &encoding_import
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long: --encoding
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help: set character encoding
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arg: encoding
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- long: --trimStrings
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- &guessCellValueTypes
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long: --guessCellValueTypes
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help: attempt to parse cell text into numbers
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- &headerLines
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long: --headerLines
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help: parse x line(s) as column headers
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arg: headerLines
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default: "1"
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conflicts: [--columnNames]
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- &ignoreLines
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long: --ignoreLines
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help: ignore first x line(s) at beginning of file
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arg: ignoreLines
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default: "-1"
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- &ignoreQuoteCharacter
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long: --ignoreQuoteCharacter
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help: do not use any quote character to enclose cells containing column separators
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- &includeFileSources
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long: --includeFileSources
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help: add column with file source
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- &includeArchiveFileName
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long: --includeArchiveFileName
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help: add column with archive file name
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- &limit
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long: --limit
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help: load at most x row(s) of data
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arg: limit
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default: "-1"
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- "eCharacter
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long: --quoteCharacter
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help: quote character to enclose cells containing column separators
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arg: quoteCharacter
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default: '\\\"'
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- &skipBlankRows
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long: --skipBlankRows
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help: do not store blank rows
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- &skipDataLines
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long: --skipDataLines
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help: discard initial x row(s) of data
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arg: skipDataLines
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default: "0"
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- &trimStrings
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long: --trimStrings
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help: trim leading & trailing whitespace from strings
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- long: --projectName
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- &projectName
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long: --projectName
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arg: projectName
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help: set a name for the OpenRefine project
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- long: --quiet
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short: -q
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help: suppress log output, print errors only
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- &projectTags
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long: --projectTags
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help: set project tags (comma separated)
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arg: projectTags
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- *quiet
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examples:
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- orcli import csv "file"
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- orcli import csv "file1" "file2"
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- cat "file" | orcli import csv
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- head -n 100 "file" | orcli import csv
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- orcli import csv "https://git.io/fj5hF"
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- |-
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orcli import csv "file" \\\\
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--separator ";" \\\\
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--columnNames "foo,bar,baz" \\\\
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--ignoreLines 1 \\\\
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--encoding "ISO-8859-1" \\\\
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--limit 100 \\\\
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--trimStrings \\\\
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--projectName "duplicates"
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--projectTags "test,urgent"
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- name: tsv
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help: import tab-separated values (TSV)
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args:
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- name: file
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help: Path to one or more files or URLs. When FILE is -, read standard input.
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default: "-"
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repeatable: true
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- *file
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flags:
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- long: --encoding
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help: set character encoding
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arg: encoding
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- long: --trimStrings
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help: trim leading & trailing whitespace from strings
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- long: --projectName
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arg: projectName
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help: set a name for the OpenRefine project
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- long: --quiet
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short: -q
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help: suppress log output, print errors only
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- *blankCellsAsStrings
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- *columnNames
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- *encoding_import
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- *guessCellValueTypes
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- *headerLines
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- *ignoreLines
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- *ignoreQuoteCharacter
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- *includeFileSources
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- *includeArchiveFileName
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- *limit
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- *quoteCharacter
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- *skipBlankRows
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- *skipDataLines
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- *trimStrings
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- *projectName
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- *projectTags
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- *quiet
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examples:
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- orcli import tsv "file"
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- orcli import tsv "file1" "file2"
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- cat "file" | orcli import tsv
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- head -n 100 "file" | orcli import tsv
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- orcli import tsv "https://git.io/fj5hF"
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- |-
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orcli import tsv "file" \\\\
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--separator ";" \\\\
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--columnNames "foo,bar,baz" \\\\
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--ignoreLines 1 \\\\
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--encoding "ISO-8859-1" \\\\
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--limit 100 \\\\
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--trimStrings \\\\
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--projectName "duplicates"
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--projectTags "test,urgent"
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- name: list
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help: list projects on OpenRefine server
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@ -126,12 +200,11 @@ commands:
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- name: info
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help: show OpenRefine project's metadata
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args:
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- name: project
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help: project name or id
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required: true
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- *project
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examples:
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- orcli info "duplicates"
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- orcli info 1234567890123
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- orcli info "duplicates" | jq -r .columns[]
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- name: test
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help: run functional tests on tmp OpenRefine workspace
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@ -139,17 +212,10 @@ commands:
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- name: transform
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help: apply undo/redo JSON file(s) to an OpenRefine project
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args:
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- name: project
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help: project name or id
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required: true
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- name: file
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help: Path to one or more files or URLs containing OpenRefine's undo/redo operation history in JSON format. When FILE is -, read standard input.
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default: "-"
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repeatable: true
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- *project
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- *file
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flags:
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- long: --quiet
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short: -q
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help: suppress log output, print errors only
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- *quiet
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examples:
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- orcli transform "duplicates" "history.json"
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- cat "history.json" | orcli transform "duplicates"
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@ -163,31 +229,27 @@ commands:
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- name: tsv
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help: export tab-separated values (TSV)
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args:
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- name: project
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help: project name or id
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required: true
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- *project
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flags:
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- long: --output
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- &output
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long: --output
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help: Write to file instead of stdout
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arg: file
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- long: --encoding
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- &encoding_export
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long: --encoding
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help: set character encoding
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arg: encoding
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default: "UTF-8"
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- long: --quiet
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short: -q
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help: suppress log output, print errors only
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- *quiet
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examples:
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- orcli export tsv "duplicates"
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- orcli export tsv "duplicates" --output "duplicates.tsv"
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- orcli export tsv "duplicates" --encoding "ISO-8859-1"
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- name: run
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help: run tmp OpenRefine workspace and execute shell script(s)
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args:
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- name: file
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help: Path to one or more files. When FILE is -, read standard input.
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default: "-"
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repeatable: true
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- *file
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flags:
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- long: --memory
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help: maximum RAM for OpenRefine java heap space
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@ -199,9 +261,7 @@ commands:
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default: "3333"
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- long: --interactive
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help: do not exit on error and keep bash shell open
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- long: --quiet
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short: -q
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help: suppress log output, print errors only
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- *quiet
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examples:
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- orcli run --interactive
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- |-
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@ -1,15 +1,13 @@
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# shellcheck shell=bash
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# shellcheck shell=bash disable=SC2154
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# call init_import function to eval args and to set basic post data
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init_import
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# check if stdin is present if selected
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if [[ ${args[file]} == '-' ]] || [[ ${args[file]} == '"-"' ]]; then
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if ! read -u 0 -t 0; then
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if [[ ${file} == '-' ]] && ! read -u 0 -t 0; then
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orcli_import_csv_usage
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exit 1
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fi
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fi
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# assemble specific post data (some options require json format)
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data+=("format=text/line-based/*sv")
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@ -19,9 +17,67 @@ if [[ ${args[--encoding]} ]]; then
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options+=', '
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options+="\"encoding\": \"${args[--encoding]}\""
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fi
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if [[ ${args[--blankCellsAsStrings]} ]]; then
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options+=', '
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options+='"storeBlankCellsAsNulls": false'
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fi
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if [[ ${args[--columnNames]} ]]; then
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IFS=',' read -ra columnNames <<< "${args[--columnNames]}"
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options+=', '
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options+="\"columnNames\": [ $(printf ',"'%s'"' "${columnNames[@]}" | cut -c2-) ]"
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fi
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if [[ ${args[--guessCellValueTypes]} ]]; then
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options+=', '
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options+='"guessCellValueTypes": true'
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fi
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if [[ ${args[--headerLines]} ]]; then
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options+=', '
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options+="\"headerLines\": ${args[--headerLines]}"
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fi
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if [[ ${args[--ignoreLines]} ]]; then
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options+=', '
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options+="\"ignoreLines\": ${args[--ignoreLines]}"
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fi
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if [[ ${args[--ignoreQuoteCharacter]} ]]; then
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options+=', '
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options+='"processQuotes": false'
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fi
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if [[ ${args[--includeFileSources]} ]]; then
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options+=', '
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options+='includeFileSources: true'
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fi
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if [[ ${args[--includeArchiveFileName]} ]]; then
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options+=', '
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options+='"includeArchiveFileName": true'
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fi
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if [[ ${args[--limit]} ]]; then
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options+=', '
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options+="\"limit\": ${args[--limit]}"
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fi
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if [[ ${args[--projectName]} ]]; then
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options+=', '
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options+="\"projectName\": \"${args[--projectName]}\""
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fi
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if [[ ${args[--quoteCharacter]} ]]; then
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options+=', '
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options+="\"quoteCharacter\": \"${args[--quoteCharacter]}\""
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fi
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if [[ ${args[--skipBlankRows]} ]]; then
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options+=', '
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options+='"storeBlankRows": false'
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fi
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if [[ ${args[--skipDataLines]} ]]; then
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options+=', '
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options+="\"skipDataLines\": ${args[--skipDataLines]}"
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fi
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if [[ ${args[--trimStrings]} ]]; then
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options+=', '
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options+="\"trimStrings\": true"
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options+='"trimStrings": true'
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fi
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if [[ ${args[--projectTags]} ]]; then
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IFS=',' read -ra projectTags <<< "${args[--projectTags]}"
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options+=', '
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options+="\"projectTags\": [ $(printf ',"'%s'"' "${projectTags[@]}" | cut -c2-) ]"
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fi
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options+=' }'
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data+=("options=${options}")
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@ -1,15 +1,13 @@
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# shellcheck shell=bash
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# shellcheck shell=bash disable=SC2154
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# call init_import function to eval args and to set basic post data
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init_import
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# check if stdin is present if selected
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if [[ ${args[file]} == '-' ]] || [[ ${args[file]} == '"-"' ]]; then
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if ! read -u 0 -t 0; then
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if [[ ${file} == '-' ]] && ! read -u 0 -t 0; then
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orcli_import_tsv_usage
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exit 1
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fi
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fi
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# assemble specific post data (some options require json format)
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data+=("format=text/line-based/*sv")
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@ -19,9 +17,67 @@ if [[ ${args[--encoding]} ]]; then
|
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options+=', '
|
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options+="\"encoding\": \"${args[--encoding]}\""
|
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fi
|
||||
if [[ ${args[--blankCellsAsStrings]} ]]; then
|
||||
options+=', '
|
||||
options+='"storeBlankCellsAsNulls": false'
|
||||
fi
|
||||
if [[ ${args[--columnNames]} ]]; then
|
||||
IFS=',' read -ra columnNames <<< "${args[--columnNames]}"
|
||||
options+=', '
|
||||
options+="\"columnNames\": [ $(printf ',"'%s'"' "${columnNames[@]}" | cut -c2-) ]"
|
||||
fi
|
||||
if [[ ${args[--guessCellValueTypes]} ]]; then
|
||||
options+=', '
|
||||
options+='"guessCellValueTypes": true'
|
||||
fi
|
||||
if [[ ${args[--headerLines]} ]]; then
|
||||
options+=', '
|
||||
options+="\"headerLines\": ${args[--headerLines]}"
|
||||
fi
|
||||
if [[ ${args[--ignoreLines]} ]]; then
|
||||
options+=', '
|
||||
options+="\"ignoreLines\": ${args[--ignoreLines]}"
|
||||
fi
|
||||
if [[ ${args[--ignoreQuoteCharacter]} ]]; then
|
||||
options+=', '
|
||||
options+='"processQuotes": false'
|
||||
fi
|
||||
if [[ ${args[--includeFileSources]} ]]; then
|
||||
options+=', '
|
||||
options+='includeFileSources: true'
|
||||
fi
|
||||
if [[ ${args[--includeArchiveFileName]} ]]; then
|
||||
options+=', '
|
||||
options+='"includeArchiveFileName": true'
|
||||
fi
|
||||
if [[ ${args[--limit]} ]]; then
|
||||
options+=', '
|
||||
options+="\"limit\": ${args[--limit]}"
|
||||
fi
|
||||
if [[ ${args[--projectName]} ]]; then
|
||||
options+=', '
|
||||
options+="\"projectName\": \"${args[--projectName]}\""
|
||||
fi
|
||||
if [[ ${args[--quoteCharacter]} ]]; then
|
||||
options+=', '
|
||||
options+="\"quoteCharacter\": \"${args[--quoteCharacter]}\""
|
||||
fi
|
||||
if [[ ${args[--skipBlankRows]} ]]; then
|
||||
options+=', '
|
||||
options+='"storeBlankRows": false'
|
||||
fi
|
||||
if [[ ${args[--skipDataLines]} ]]; then
|
||||
options+=', '
|
||||
options+="\"skipDataLines\": ${args[--skipDataLines]}"
|
||||
fi
|
||||
if [[ ${args[--trimStrings]} ]]; then
|
||||
options+=', '
|
||||
options+="\"trimStrings\": true"
|
||||
options+='"trimStrings": true'
|
||||
fi
|
||||
if [[ ${args[--projectTags]} ]]; then
|
||||
IFS=',' read -ra projectTags <<< "${args[--projectTags]}"
|
||||
options+=', '
|
||||
options+="\"projectTags\": [ $(printf ',"'%s'"' "${projectTags[@]}" | cut -c2-) ]"
|
||||
fi
|
||||
options+=' }'
|
||||
data+=("options=${options}")
|
||||
|
|
|
|||
|
|
@ -1,9 +1,8 @@
|
|||
# common import tasks to support multiple files and URLs
|
||||
# shellcheck shell=bash
|
||||
# shellcheck shell=bash disable=SC2154
|
||||
function init_import() {
|
||||
local files file
|
||||
# catch args, convert the space delimited string to an array
|
||||
files=()
|
||||
local files=()
|
||||
eval "files=(${args[file]})"
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
|
|
@ -14,7 +13,7 @@ function init_import() {
|
|||
if ! curl -fs --location "${files[$i]}" >"${tmpdir}/${files[$i]//[^A-Za-z0-9._-]/_}"; then
|
||||
error "download of ${files[$i]} failed!"
|
||||
fi
|
||||
files[$i]="${tmpdir}/${files[$i]//[^A-Za-z0-9._-]/_}"
|
||||
files[i]="${tmpdir}/${files[$i]//[^A-Za-z0-9._-]/_}"
|
||||
fi
|
||||
done
|
||||
# read pipes if name starts with /dev/fd
|
||||
|
|
@ -23,7 +22,7 @@ function init_import() {
|
|||
if ! cat "${files[$i]}" >"${tmpdir}/${files[$i]//[^A-Za-z0-9._-]/_}"; then
|
||||
error "reading of ${files[$i]} failed!"
|
||||
fi
|
||||
files[$i]="${tmpdir}/${files[$i]//[^A-Za-z0-9._-]/_}"
|
||||
files[i]="${tmpdir}/${files[$i]//[^A-Za-z0-9._-]/_}"
|
||||
fi
|
||||
done
|
||||
# create a zip archive if there are multiple files
|
||||
|
|
@ -35,23 +34,4 @@ function init_import() {
|
|||
else
|
||||
file="${files[0]}"
|
||||
fi
|
||||
# basic post data
|
||||
if [[ ${file} == "-" ]]; then
|
||||
data+=("project-file=@-")
|
||||
else
|
||||
if ! path=$(readlink -e "${file}"); then
|
||||
error "cannot open ${file} (no such file)!"
|
||||
fi
|
||||
data+=("project-file=@${path}")
|
||||
fi
|
||||
if [[ ${args[--projectName]} ]]; then
|
||||
data+=("project-name=${args[--projectName]}")
|
||||
else
|
||||
if [[ ${file} == "-" ]]; then
|
||||
name="Untitled"
|
||||
else
|
||||
name="$(basename "${path}" | tr '.' ' ')"
|
||||
fi
|
||||
data+=("project-name=${name}")
|
||||
fi
|
||||
}
|
||||
|
|
|
|||
|
|
@ -2,18 +2,18 @@
|
|||
# shellcheck shell=bash disable=SC2154
|
||||
function post_export() {
|
||||
local curloptions
|
||||
# post
|
||||
mapfile -t curloptions < <(for d in "$@"; do
|
||||
echo "--data"
|
||||
echo "$d"
|
||||
done)
|
||||
# support file output
|
||||
if [[ ${args[--output]} ]]; then
|
||||
if ! mkdir -p "$(dirname "${args[--output]}")"; then
|
||||
error "unable to create parent directory for ${args[--output]}"
|
||||
fi
|
||||
curloptions+=("--output")
|
||||
curloptions+=("${args[--output]}")
|
||||
curloptions+=("--output" "${args[--output]}")
|
||||
fi
|
||||
# post
|
||||
if ! curl -fs "${curloptions[@]}" "${OPENREFINE_URL}/command/core/export-rows"; then
|
||||
error "exporting ${args[project]} failed!"
|
||||
else
|
||||
|
|
|
|||
|
|
@ -1,15 +1,31 @@
|
|||
# post to create-project endpoint and validate
|
||||
# shellcheck shell=bash disable=SC2154
|
||||
function post_import() {
|
||||
local curloptions
|
||||
local projectid
|
||||
local projectname
|
||||
local rows
|
||||
# post
|
||||
local curloptions projectid projectname rows
|
||||
mapfile -t curloptions < <(for d in "$@"; do
|
||||
echo "--form"
|
||||
echo "--form-string"
|
||||
echo "$d"
|
||||
done)
|
||||
# basic post data
|
||||
if [[ ${file} == "-" ]]; then
|
||||
curloptions+=("--form" "project-file=@-")
|
||||
else
|
||||
if ! path=$(readlink -e "${file}"); then
|
||||
error "cannot open ${file} (no such file)!"
|
||||
fi
|
||||
curloptions+=("--form" "project-file=@${path}")
|
||||
fi
|
||||
if [[ ${args[--projectName]} ]]; then
|
||||
curloptions+=("--form-string" "project-name=${args[--projectName]}")
|
||||
else
|
||||
if [[ ${file} == "-" ]]; then
|
||||
name="Untitled"
|
||||
else
|
||||
name="$(basename "${path}" | tr '.' ' ')"
|
||||
fi
|
||||
curloptions+=("--form-string" "project-name=${name}")
|
||||
fi
|
||||
# post
|
||||
if ! redirect_url="$(curl -fs --write-out "%{redirect_url}\n" "${curloptions[@]}" "${OPENREFINE_URL}/command/core/create-project-from-upload$(get_csrf)")"; then
|
||||
error "importing ${args[file]} failed!"
|
||||
fi
|
||||
|
|
|
|||
|
|
@ -35,11 +35,11 @@ send_completions() {
|
|||
echo $' ;;'
|
||||
echo $''
|
||||
echo $' \'import csv\'*)'
|
||||
echo $' while read -r; do COMPREPLY+=( "$REPLY" ); done < <( compgen -W "$(_orcli_completions_filter "--encoding --help --projectName --quiet --separator --trimStrings -h -q")" -- "$cur" )'
|
||||
echo $' while read -r; do COMPREPLY+=( "$REPLY" ); done < <( compgen -W "$(_orcli_completions_filter "--blankCellsAsStrings --columnNames --encoding --guessCellValueTypes --headerLines --help --ignoreLines --ignoreQuoteCharacter --includeArchiveFileName --includeFileSources --limit --projectName --projectTags --quiet --quoteCharacter --separator --skipBlankRows --skipDataLines --trimStrings -h -q")" -- "$cur" )'
|
||||
echo $' ;;'
|
||||
echo $''
|
||||
echo $' \'import tsv\'*)'
|
||||
echo $' while read -r; do COMPREPLY+=( "$REPLY" ); done < <( compgen -W "$(_orcli_completions_filter "--encoding --help --projectName --quiet --trimStrings -h -q")" -- "$cur" )'
|
||||
echo $' while read -r; do COMPREPLY+=( "$REPLY" ); done < <( compgen -W "$(_orcli_completions_filter "--blankCellsAsStrings --columnNames --encoding --guessCellValueTypes --headerLines --help --ignoreLines --ignoreQuoteCharacter --includeArchiveFileName --includeFileSources --limit --projectName --projectTags --quiet --quoteCharacter --skipBlankRows --skipDataLines --trimStrings -h -q")" -- "$cur" )'
|
||||
echo $' ;;'
|
||||
echo $''
|
||||
echo $' \'export tsv\'*)'
|
||||
|
|
|
|||
|
|
@ -0,0 +1,4 @@
|
|||
a,b,c
|
||||
1,2,3
|
||||
ה,י,‗
|
||||
$,\,'
|
||||
|
|
|
@ -0,0 +1,4 @@
|
|||
a; b; c
|
||||
1; 2; 3
|
||||
0; 0; 0
|
||||
$; \; '
|
||||
|
|
|
@ -10,20 +10,19 @@ trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
|||
cp data/example.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion (empty file)
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
DATA
|
||||
touch "${tmpdir}/${t}.assert"
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv"
|
||||
orcli list | grep "${t} csv"
|
||||
orcli delete "${t} csv"
|
||||
orcli list | grep "${t} csv" > "${t}.output" || exit 0
|
||||
orcli import csv "${t}.csv"
|
||||
orcli import csv "${t}.csv"
|
||||
orcli list | grep "${t} csv"
|
||||
orcli delete --force "${t} csv"
|
||||
orcli list | grep "${t} csv" >> "${t}.output" || exit 0
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli list | grep "${t}"
|
||||
orcli delete "${t}"
|
||||
orcli list | grep "${t}" > "${t}.output" || exit 0
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli list | grep "${t}"
|
||||
orcli delete --force "${t}"
|
||||
orcli list | grep "${t}" >> "${t}.output" || exit 0
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
|
|||
|
|
@ -14,8 +14,8 @@ cp data/example.tsv "${tmpdir}/${t}.assert"
|
|||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv"
|
||||
orcli export tsv "${t} csv" --output "${t}.output"
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli export tsv "${t}" --output "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
|
|||
|
|
@ -0,0 +1,49 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-blankCellsAsStrings"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
a,b,c
|
||||
1,2,3
|
||||
0,,0
|
||||
$,\,'
|
||||
DATA
|
||||
|
||||
cat << "DATA" > "${tmpdir}/${t}.transform"
|
||||
[
|
||||
{
|
||||
"op": "core/text-transform",
|
||||
"engineConfig": {
|
||||
"facets": [],
|
||||
"mode": "row-based"
|
||||
},
|
||||
"columnName": "b",
|
||||
"expression": "grel:isNull(value)",
|
||||
"onError": "keep-original",
|
||||
"repeat": false,
|
||||
"repeatCount": 10
|
||||
}
|
||||
]
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
1 false 3
|
||||
0 false 0
|
||||
$ false '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --blankCellsAsStrings
|
||||
orcli transform "${t}" "${tmpdir}/${t}.transform"
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,27 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-columnNames"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
foo bar baz
|
||||
a b c
|
||||
1 2 3
|
||||
0 0 0
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --columnNames "foo,bar,baz"
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,26 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-encoding"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example-iso-8859-1.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
1 2 3
|
||||
ä é ß
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --encoding "ISO-8859-1"
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,31 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-guessCellValueTypes"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
a,b,c
|
||||
1,2,3
|
||||
01,02,03
|
||||
$,\,'
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
1 2 3
|
||||
1 2 3
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --guessCellValueTypes
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,27 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-headerLines"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
Column 1 Column 2 Column 3
|
||||
a b c
|
||||
1 2 3
|
||||
0 0 0
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --headerLines 0
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,25 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-ignoreLines"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
1 2 3
|
||||
0 0 0
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --ignoreLines 1
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,32 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-ignoreQuoteCharacter"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
a,b,c
|
||||
1,"2,0",3
|
||||
0,0,0
|
||||
$,\,'
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c Column 4
|
||||
1 2 0 3
|
||||
0 0 0
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
# OpenRefine 4.x fails without headerLines manually set
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --ignoreQuoteCharacter --headerLines 1
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,30 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-includeArchiveFileName"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}-1.csv"
|
||||
cp data/example.csv "${tmpdir}/${t}-2.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
Archive a b c
|
||||
Untitled.zip 1 2 3
|
||||
Untitled.zip 0 0 0
|
||||
Untitled.zip $ \ '
|
||||
Untitled.zip 1 2 3
|
||||
Untitled.zip 0 0 0
|
||||
Untitled.zip $ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}-1.csv" "${t}-2.csv" --projectName "${t}" --includeArchiveFileName
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,30 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-includeFileSources"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}-1.csv"
|
||||
cp data/example.csv "${tmpdir}/${t}-2.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
File a b c
|
||||
import-csv-includeFileSources-1.csv 1 2 3
|
||||
import-csv-includeFileSources-1.csv 0 0 0
|
||||
import-csv-includeFileSources-1.csv $ \ '
|
||||
import-csv-includeFileSources-2.csv 1 2 3
|
||||
import-csv-includeFileSources-2.csv 0 0 0
|
||||
import-csv-includeFileSources-2.csv $ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}-1.csv" "${t}-2.csv" --projectName "${t}" --includeFileSources
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,25 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-limit"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
1 2 3
|
||||
0 0 0
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --limit 2
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,25 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-projectTags"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
foo
|
||||
bar
|
||||
baz
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --projectTags "foo,bar,baz"
|
||||
orcli info "${t}" | jq -r .tags[] > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,20 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-quiet"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion (empty file)
|
||||
touch "${tmpdir}/${t}.assert"
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --quiet &> "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,31 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-quoteCharacter"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
a,b,c
|
||||
1,%2,0%,3
|
||||
0,0,0
|
||||
$,\,'
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
1 2,0 3
|
||||
0 0 0
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --quoteCharacter "%"
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,21 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-separator"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example-separator.csv "${tmpdir}/${t}.csv"
|
||||
|
||||
# assertion
|
||||
cp data/example.tsv "${tmpdir}/${t}.assert"
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --separator "; "
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,30 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-skipBlankRows"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
a,b,c
|
||||
1,2,3
|
||||
,,
|
||||
$,\,'
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
1 2 3
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --skipBlankRows
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,30 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-skipDataLines"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
a,b,c
|
||||
1,2,3
|
||||
0,0,0
|
||||
$,\,'
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
0 0 0
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --skipDataLines 1
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,31 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-trimStrings"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
a,b,c
|
||||
1 , 2 , 3
|
||||
0,0,0
|
||||
$,\,'
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
a b c
|
||||
1 2 3
|
||||
0 0 0
|
||||
$ \ '
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}" --trimStrings
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -0,0 +1,31 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-csv-unicode biểu tượng cảm xúc ⛲"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cat << "DATA" > "${tmpdir}/${t}.csv"
|
||||
⌨,code,meaning
|
||||
⛲,1F347,FOUNTAIN
|
||||
⛳,1F349,FLAG IN HOLE
|
||||
⛵,1F352,SAILBOAT
|
||||
DATA
|
||||
|
||||
# assertion
|
||||
cat << "DATA" > "${tmpdir}/${t}.assert"
|
||||
⌨ code meaning
|
||||
⛲ 1F347 FOUNTAIN
|
||||
⛳ 1F349 FLAG IN HOLE
|
||||
⛵ 1F352 SAILBOAT
|
||||
DATA
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -14,8 +14,8 @@ cp data/example.tsv "${tmpdir}/${t}.assert"
|
|||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv"
|
||||
orcli export tsv "${t} csv" > "${t}.output"
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
|
|||
|
|
@ -0,0 +1,21 @@
|
|||
#!/bin/bash
|
||||
|
||||
t="import-tsv"
|
||||
|
||||
# create tmp directory
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap '{ rm -rf "${tmpdir}"; }' 0 2 3 15
|
||||
|
||||
# input
|
||||
cp data/example.tsv "${tmpdir}/${t}.tsv"
|
||||
|
||||
# assertion
|
||||
cp data/example.tsv "${tmpdir}/${t}.assert"
|
||||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import tsv "${t}.tsv" --projectName "${t}"
|
||||
orcli export tsv "${t}" > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
@ -18,8 +18,8 @@ DATA
|
|||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv"
|
||||
orcli info "${t} csv" | jq -r .columns[] > "${t}.output"
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli info "${t}" | jq -r .columns[] > "${t}.output"
|
||||
|
||||
# test
|
||||
diff -u "${t}.assert" "${t}.output"
|
||||
|
|
|
|||
|
|
@ -11,7 +11,7 @@ cp data/example.csv "${tmpdir}/${t}.csv"
|
|||
|
||||
# action
|
||||
cd "${tmpdir}" || exit 1
|
||||
orcli import csv "${t}.csv"
|
||||
orcli import csv "${t}.csv" --projectName "${t}"
|
||||
orcli list > "${t}.output"
|
||||
|
||||
# test
|
||||
|
|
|
|||
Loading…
Reference in New Issue