prepare distribution on PyPI
moved parser from refine.py to google/refine/__main__.py to allow module execution (python -m google.refine); script refine.py is now just a forwarding to __main__.py
This commit is contained in:
Felix Lohmeier
parent
b8675fc894
commit
ece61c1096
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@ -2,6 +2,6 @@ build
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dist
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*.pyc
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.*
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refine_client.egg-info
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openrefine_client.egg-info
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refine.spec
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README.html
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@ -2,3 +2,4 @@ include README.md
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include COPYING.txt
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recursive-include tests/data *.csv
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recursive-include tests *.py
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prune docker
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10
README.md
10
README.md
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@ -45,11 +45,13 @@ The environment variables `OPENREFINE_HOST` and `OPENREFINE_PORT` enable overrid
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## Installation
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Install dependencies, which currently is `urllib2_file`:
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```
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pip install openrefine-client
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```
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```
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sudo pip install -r requirements.txt
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```
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(requires Python 2.x, depends on urllib2_file>=0.2.1)
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## Tests
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Ensure you have a Refine server running somewhere and, if necessary, set the environment vars as above.
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@ -0,0 +1,218 @@
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#! /usr/bin/env python
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"""
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Script to provide a command line interface to a OpenRefine server.
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"""
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# Copyright (c) 2011 Paul Makepeace, Real Programmers. All rights reserved.
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# This program is free software: you can redistribute it and/or modify
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# it under the terms of the GNU General Public License as published by
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# the Free Software Foundation, either version 3 of the License, or
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# (at your option) any later version.
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# This program is distributed in the hope that it will be useful,
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# but WITHOUT ANY WARRANTY; without even the implied warranty of
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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# GNU General Public License for more details.
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# You should have received a copy of the GNU General Public License
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# along with this program. If not, see <http://www.gnu.org/licenses/>
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import optparse
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import os
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import sys
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from google.refine import refine
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from google.refine import client
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reload(sys)
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sys.setdefaultencoding('utf-8')
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class myParser(optparse.OptionParser):
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def format_epilog(self, formatter):
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return self.epilog
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PARSER = \
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myParser(description='Script to provide a command line interface to an OpenRefine server.',
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usage='usage: %prog [--help | OPTIONS]',
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epilog="""
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Examples:
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--list # show list of projects (id: name)
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--list -H 127.0.0.1 -P 80 # specify hostname and port
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--info 2161595260364 # show metadata of project
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--info "christmas gifts"
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--create example.csv # create new project from file example.csv
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--create example.tsv --encoding=UTF-8
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--create example.xml --recordPath=collection --recordPath=record
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--create example.json --recordPath=_ --recordPath=_
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--create example.xlsx --sheets=0
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--create example.ods --sheets=0
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--apply trim.json 2161595260364 # apply rules in trim.json to project 1234...
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--apply trim.json "christmas gifts"
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--export 2161595260364 > project.tsv # export project 2161595260364 in tsv format
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--export "christmas gifts" > project.tsv
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--export --output=project.xlsx 2161595260364 # export project in xlsx format
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--export --output=project.xlsx "christmas gifts"
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--export "My Address Book" --template='{ "friend" : {{jsonize(cells["friend"].value)}}, "address" : {{jsonize(cells["address"].value)}} }' --prefix='{ "rows" : [' --rowSeparator ',' --suffix '] }' --filterQuery="^mary$"
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--delete 2161595260364 # delete project
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--delete "christmas gifts"
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""")
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group1 = optparse.OptionGroup(PARSER, 'Connection options')
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group1.add_option('-H', '--host', dest='host', metavar='127.0.0.1',
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help='OpenRefine hostname (default: 127.0.0.1)')
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group1.add_option('-P', '--port', dest='port', metavar='3333',
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help='OpenRefine port (default: 3333)')
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PARSER.add_option_group(group1)
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group2 = optparse.OptionGroup(PARSER, 'Commands')
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group2.add_option('-c', '--create', dest='create', metavar='[FILE]',
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help='Create project from file. The filename ending (e.g. .csv) defines the input format (csv,tsv,xml,json,txt,xls,xlsx,ods)')
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group2.add_option('-l', '--list', dest='list', action='store_true',
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help='List projects')
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PARSER.add_option_group(group2)
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group3 = optparse.OptionGroup(PARSER, 'Commands with argument [PROJECTID/PROJECTNAME]')
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group3.add_option('-d', '--delete', dest='delete', action='store_true',
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help='Delete project')
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group3.add_option('-f', '--apply', dest='apply', metavar='[FILE]',
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help='Apply JSON rules to OpenRefine project')
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group3.add_option('-E', '--export', dest='export', action='store_true',
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help='Export project in tsv format to stdout.')
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group3.add_option('-o', '--output', dest='output', metavar='[FILE]',
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help='Export project to file. The filename ending (e.g. .tsv) defines the output format (csv,tsv,xls,xlsx,html)')
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group3.add_option('--info', dest='info', action='store_true',
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help='show project metadata')
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PARSER.add_option_group(group3)
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group4 = optparse.OptionGroup(PARSER, 'Create options')
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group4.add_option('--columnWidths', dest='columnWidths',
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help='(txt/fixed-width) please provide widths separated by comma (e.g. 7,5)')
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group4.add_option('--encoding', dest='encoding',
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help='(csv,tsv,txt), please provide short encoding name (e.g. UTF-8)')
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group4.add_option('--guessCellValueTypes', dest='guessCellValueTypes', metavar='true/false', choices=('true', 'false'),
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help='(xml,csv,tsv,txt,json, default: false)')
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group4.add_option('--headerLines', dest='headerLines', type="int",
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help='(csv,tsv,txt/fixed-width,xls,xlsx,ods), default: 1, default txt/fixed-width: 0')
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group4.add_option('--ignoreLines', dest='ignoreLines', type="int",
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help='(csv,tsv,txt,xls,xlsx,ods), default: -1')
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group4.add_option('--includeFileSources', dest='includeFileSources', metavar='true/false', choices=('true', 'false'),
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help='(all formats), default: false')
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group4.add_option('--limit', dest='limit', type="int",
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help='(all formats), default: -1')
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group4.add_option('--linesPerRow', dest='linesPerRow', type="int",
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help='(txt/line-based), default: 1')
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group4.add_option('--processQuotes', dest='processQuotes', metavar='true/false', choices=('true', 'false'),
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help='(csv,tsv), default: true')
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group4.add_option('--projectName', dest='project_name',
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help='(all formats), default: filename')
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group4.add_option('--recordPath', dest='recordPath', action='append',
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help='(xml,json), please provide path in multiple arguments without slashes, e.g. /collection/record/ should be entered like this: --recordPath=collection --recordPath=record, default xml: record, default json: _ _')
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group4.add_option('--separator', dest='separator',
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help='(csv,tsv), default csv: , default tsv: \\t')
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group4.add_option('--sheets', dest='sheets', action='append', type="int",
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help='(xls,xlsx,ods), please provide sheets in multiple arguments, e.g. --sheets=0 --sheets=1, default: 0 (first sheet)')
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group4.add_option('--skipDataLines', dest='skipDataLines', type="int",
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help='(csv,tsv,txt,xls,xlsx,ods), default: 0, default line-based: -1')
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group4.add_option('--storeBlankRows', dest='storeBlankRows', metavar='true/false', choices=('true', 'false'),
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help='(csv,tsv,txt,xls,xlsx,ods), default: true')
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group4.add_option('--storeBlankCellsAsNulls', dest='storeBlankCellsAsNulls', metavar='true/false', choices=('true', 'false'),
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help='(csv,tsv,txt,xls,xlsx,ods), default: true')
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group4.add_option('--storeEmptyStrings', dest='storeEmptyStrings', metavar='true/false', choices=('true', 'false'),
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help='(xml,json), default: true')
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group4.add_option('--trimStrings', dest='trimStrings', metavar='true/false', choices=('true', 'false'),
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help='(xml,json), default: false')
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PARSER.add_option_group(group4)
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group5 = optparse.OptionGroup(PARSER, 'Legacy options')
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group5.add_option('--format', dest='input_format',
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help='Specify input format (csv,tsv,xml,json,line-based,fixed-width,xls,xlsx,ods)')
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PARSER.add_option_group(group5)
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group6= optparse.OptionGroup(PARSER, 'Templating export options')
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group6.add_option('--template', dest='template',
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help='mandatory; (big) text string that you enter in the *row template* textfield in the export/templating menu in the browser app)')
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group6.add_option('--mode', dest='mode', metavar='row-based/record-based', choices=('row-based', 'record-based'),
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help='engine mode (default: row-based)')
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group6.add_option('--prefix', dest='prefix',
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help='text string that you enter in the *prefix* textfield in the browser app')
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group6.add_option('--rowSeparator', dest='rowSeparator',
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help='text string that you enter in the *row separator* textfield in the browser app')
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group6.add_option('--suffix', dest='suffix',
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help='text string that you enter in the *suffix* textfield in the browser app')
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group6.add_option('--filterQuery', dest='filterQuery', metavar='REGEX',
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help='Simple RegEx text filter on filterColumn, e.g. ^12015$'),
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group6.add_option('--filterColumn', dest='filterColumn', metavar='COLUMNNAME',
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help='column name for filterQuery (default: name of first column)')
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group6.add_option('--facets', dest='facets',
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help='facets config in json format (may be extracted with browser dev tools in browser app)')
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group6.add_option('--splitToFiles', dest='splitToFiles', metavar='true/false', choices=('true', 'false'),
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help='will split each row/record into a single file; it specifies a presumably unique character series for splitting; --prefix and --suffix will be applied to all files; filename-prefix can be specified with --output (default: %Y%m%d)')
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group6.add_option('--suffixById', dest='suffixById', metavar='true/false', choices=('true', 'false'),
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help='enhancement option for --splitToFiles; will generate filename-suffix from values in key column')
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PARSER.add_option_group(group6)
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#noinspection PyPep8Naming
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def main():
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"""Command line interface."""
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# get environment variables in docker network
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docker_host = os.environ.get('OPENREFINE_SERVER_PORT_3333_TCP_ADDR')
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if docker_host:
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os.environ["OPENREFINE_HOST"] = docker_host
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refine.REFINE_HOST = docker_host
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docker_port = os.environ.get('OPENREFINE_SERVER_PORT_3333_TCP_PORT')
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if docker_port:
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os.environ["OPENREFINE_PORT"] = docker_port
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refine.REFINE_PORT = docker_port
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options, args = PARSER.parse_args()
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commands_dict = { group2_arg.dest : getattr(options, group2_arg.dest) for group2_arg in group2.option_list }
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commands_dict.update({ group3_arg.dest : getattr(options, group3_arg.dest) for group3_arg in group3.option_list })
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commands_dict = { k: v for k, v in commands_dict.items() if v != None }
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if not commands_dict:
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PARSER.print_usage()
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return
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if options.host:
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refine.REFINE_HOST = options.host
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if options.port:
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refine.REFINE_PORT = options.port
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if args and not str.isdigit(args[0]):
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projects = refine.Refine(refine.RefineServer()).list_projects().items()
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idlist = []
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for project_id, project_info in projects:
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if args[0] == project_info['name']:
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idlist.append(str(project_id))
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if len(idlist) > 1:
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raise Exception('Found at least two projects. Please specify project by id.')
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else:
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args[0] = idlist[0]
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if options.list:
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client.list_projects()
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if options.create:
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client.create_project(options)
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if options.delete:
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project = refine.RefineProject(args[0])
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project.delete()
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if options.apply:
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project = refine.RefineProject(args[0])
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response = project.apply_operations(options.apply)
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if response != 'ok':
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print >> sys.stderr, 'Failed to apply %s: %s' \
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% (options.apply, response)
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return project
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if options.export or options.output:
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project = refine.RefineProject(args[0])
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client.export_project(project, options)
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return project
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if options.info:
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client.info(args[0])
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project = refine.RefineProject(args[0])
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return project
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if __name__ == "__main__":
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# execute only if run as a script
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main()
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@ -19,200 +19,8 @@ Script to provide a command line interface to a OpenRefine server.
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# along with this program. If not, see <http://www.gnu.org/licenses/>
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import optparse
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import os
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import sys
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from google.refine import refine
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from google.refine import client
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reload(sys)
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sys.setdefaultencoding('utf-8')
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class myParser(optparse.OptionParser):
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def format_epilog(self, formatter):
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return self.epilog
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PARSER = \
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myParser(description='Script to provide a command line interface to an OpenRefine server.',
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usage='usage: %prog [--help | OPTIONS]',
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epilog="""
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Examples:
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--list # show list of projects (id: name)
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--list -H 127.0.0.1 -P 80 # specify hostname and port
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--info 2161595260364 # show metadata of project
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--info "christmas gifts"
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--create example.csv # create new project from file example.csv
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--create example.tsv --encoding=UTF-8
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--create example.xml --recordPath=collection --recordPath=record
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--create example.json --recordPath=_ --recordPath=_
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--create example.xlsx --sheets=0
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--create example.ods --sheets=0
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--apply trim.json 2161595260364 # apply rules in trim.json to project 1234...
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--apply trim.json "christmas gifts"
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--export 2161595260364 > project.tsv # export project 2161595260364 in tsv format
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--export "christmas gifts" > project.tsv
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--export --output=project.xlsx 2161595260364 # export project in xlsx format
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--export --output=project.xlsx "christmas gifts"
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--export "My Address Book" --template='{ "friend" : {{jsonize(cells["friend"].value)}}, "address" : {{jsonize(cells["address"].value)}} }' --prefix='{ "rows" : [' --rowSeparator ',' --suffix '] }' --filterQuery="^mary$"
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--delete 2161595260364 # delete project
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--delete "christmas gifts"
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""")
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group1 = optparse.OptionGroup(PARSER, 'Connection options')
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group1.add_option('-H', '--host', dest='host', metavar='127.0.0.1',
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help='OpenRefine hostname (default: 127.0.0.1)')
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group1.add_option('-P', '--port', dest='port', metavar='3333',
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help='OpenRefine port (default: 3333)')
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PARSER.add_option_group(group1)
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group2 = optparse.OptionGroup(PARSER, 'Commands')
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group2.add_option('-c', '--create', dest='create', metavar='[FILE]',
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help='Create project from file. The filename ending (e.g. .csv) defines the input format (csv,tsv,xml,json,txt,xls,xlsx,ods)')
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group2.add_option('-l', '--list', dest='list', action='store_true',
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help='List projects')
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PARSER.add_option_group(group2)
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group3 = optparse.OptionGroup(PARSER, 'Commands with argument [PROJECTID/PROJECTNAME]')
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group3.add_option('-d', '--delete', dest='delete', action='store_true',
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help='Delete project')
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group3.add_option('-f', '--apply', dest='apply', metavar='[FILE]',
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help='Apply JSON rules to OpenRefine project')
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group3.add_option('-E', '--export', dest='export', action='store_true',
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help='Export project in tsv format to stdout.')
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group3.add_option('-o', '--output', dest='output', metavar='[FILE]',
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help='Export project to file. The filename ending (e.g. .tsv) defines the output format (csv,tsv,xls,xlsx,html)')
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group3.add_option('--info', dest='info', action='store_true',
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help='show project metadata')
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PARSER.add_option_group(group3)
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group4 = optparse.OptionGroup(PARSER, 'Create options')
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group4.add_option('--columnWidths', dest='columnWidths',
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help='(txt/fixed-width) please provide widths separated by comma (e.g. 7,5)')
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group4.add_option('--encoding', dest='encoding',
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help='(csv,tsv,txt), please provide short encoding name (e.g. UTF-8)')
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group4.add_option('--guessCellValueTypes', dest='guessCellValueTypes', metavar='true/false', choices=('true', 'false'),
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help='(xml,csv,tsv,txt,json, default: false)')
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group4.add_option('--headerLines', dest='headerLines', type="int",
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help='(csv,tsv,txt/fixed-width,xls,xlsx,ods), default: 1, default txt/fixed-width: 0')
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group4.add_option('--ignoreLines', dest='ignoreLines', type="int",
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help='(csv,tsv,txt,xls,xlsx,ods), default: -1')
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group4.add_option('--includeFileSources', dest='includeFileSources', metavar='true/false', choices=('true', 'false'),
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help='(all formats), default: false')
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group4.add_option('--limit', dest='limit', type="int",
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help='(all formats), default: -1')
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group4.add_option('--linesPerRow', dest='linesPerRow', type="int",
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help='(txt/line-based), default: 1')
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group4.add_option('--processQuotes', dest='processQuotes', metavar='true/false', choices=('true', 'false'),
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help='(csv,tsv), default: true')
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group4.add_option('--projectName', dest='project_name',
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help='(all formats), default: filename')
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group4.add_option('--recordPath', dest='recordPath', action='append',
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help='(xml,json), please provide path in multiple arguments without slashes, e.g. /collection/record/ should be entered like this: --recordPath=collection --recordPath=record, default xml: record, default json: _ _')
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group4.add_option('--separator', dest='separator',
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help='(csv,tsv), default csv: , default tsv: \\t')
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group4.add_option('--sheets', dest='sheets', action='append', type="int",
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help='(xls,xlsx,ods), please provide sheets in multiple arguments, e.g. --sheets=0 --sheets=1, default: 0 (first sheet)')
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group4.add_option('--skipDataLines', dest='skipDataLines', type="int",
|
||||
help='(csv,tsv,txt,xls,xlsx,ods), default: 0, default line-based: -1')
|
||||
group4.add_option('--storeBlankRows', dest='storeBlankRows', metavar='true/false', choices=('true', 'false'),
|
||||
help='(csv,tsv,txt,xls,xlsx,ods), default: true')
|
||||
group4.add_option('--storeBlankCellsAsNulls', dest='storeBlankCellsAsNulls', metavar='true/false', choices=('true', 'false'),
|
||||
help='(csv,tsv,txt,xls,xlsx,ods), default: true')
|
||||
group4.add_option('--storeEmptyStrings', dest='storeEmptyStrings', metavar='true/false', choices=('true', 'false'),
|
||||
help='(xml,json), default: true')
|
||||
group4.add_option('--trimStrings', dest='trimStrings', metavar='true/false', choices=('true', 'false'),
|
||||
help='(xml,json), default: false')
|
||||
PARSER.add_option_group(group4)
|
||||
|
||||
group5 = optparse.OptionGroup(PARSER, 'Legacy options')
|
||||
group5.add_option('--format', dest='input_format',
|
||||
help='Specify input format (csv,tsv,xml,json,line-based,fixed-width,xls,xlsx,ods)')
|
||||
PARSER.add_option_group(group5)
|
||||
|
||||
group6= optparse.OptionGroup(PARSER, 'Templating export options')
|
||||
group6.add_option('--template', dest='template',
|
||||
help='mandatory; (big) text string that you enter in the *row template* textfield in the export/templating menu in the browser app)')
|
||||
group6.add_option('--mode', dest='mode', metavar='row-based/record-based', choices=('row-based', 'record-based'),
|
||||
help='engine mode (default: row-based)')
|
||||
group6.add_option('--prefix', dest='prefix',
|
||||
help='text string that you enter in the *prefix* textfield in the browser app')
|
||||
group6.add_option('--rowSeparator', dest='rowSeparator',
|
||||
help='text string that you enter in the *row separator* textfield in the browser app')
|
||||
group6.add_option('--suffix', dest='suffix',
|
||||
help='text string that you enter in the *suffix* textfield in the browser app')
|
||||
group6.add_option('--filterQuery', dest='filterQuery', metavar='REGEX',
|
||||
help='Simple RegEx text filter on filterColumn, e.g. ^12015$'),
|
||||
group6.add_option('--filterColumn', dest='filterColumn', metavar='COLUMNNAME',
|
||||
help='column name for filterQuery (default: name of first column)')
|
||||
group6.add_option('--facets', dest='facets',
|
||||
help='facets config in json format (may be extracted with browser dev tools in browser app)')
|
||||
group6.add_option('--splitToFiles', dest='splitToFiles', metavar='true/false', choices=('true', 'false'),
|
||||
help='will split each row/record into a single file; it specifies a presumably unique character series for splitting; --prefix and --suffix will be applied to all files; filename-prefix can be specified with --output (default: %Y%m%d)')
|
||||
group6.add_option('--suffixById', dest='suffixById', metavar='true/false', choices=('true', 'false'),
|
||||
help='enhancement option for --splitToFiles; will generate filename-suffix from values in key column')
|
||||
PARSER.add_option_group(group6)
|
||||
|
||||
#noinspection PyPep8Naming
|
||||
def main():
|
||||
"""Command line interface."""
|
||||
|
||||
# get environment variables in docker network
|
||||
docker_host = os.environ.get('OPENREFINE_SERVER_PORT_3333_TCP_ADDR')
|
||||
if docker_host:
|
||||
os.environ["OPENREFINE_HOST"] = docker_host
|
||||
refine.REFINE_HOST = docker_host
|
||||
docker_port = os.environ.get('OPENREFINE_SERVER_PORT_3333_TCP_PORT')
|
||||
if docker_port:
|
||||
os.environ["OPENREFINE_PORT"] = docker_port
|
||||
refine.REFINE_PORT = docker_port
|
||||
|
||||
options, args = PARSER.parse_args()
|
||||
commands_dict = { group2_arg.dest : getattr(options, group2_arg.dest) for group2_arg in group2.option_list }
|
||||
commands_dict.update({ group3_arg.dest : getattr(options, group3_arg.dest) for group3_arg in group3.option_list })
|
||||
commands_dict = { k: v for k, v in commands_dict.items() if v != None }
|
||||
if not commands_dict:
|
||||
PARSER.print_usage()
|
||||
return
|
||||
if options.host:
|
||||
refine.REFINE_HOST = options.host
|
||||
if options.port:
|
||||
refine.REFINE_PORT = options.port
|
||||
if args and not str.isdigit(args[0]):
|
||||
projects = refine.Refine(refine.RefineServer()).list_projects().items()
|
||||
idlist = []
|
||||
for project_id, project_info in projects:
|
||||
if args[0] == project_info['name']:
|
||||
idlist.append(str(project_id))
|
||||
if len(idlist) > 1:
|
||||
raise Exception('Found at least two projects. Please specify project by id.')
|
||||
else:
|
||||
args[0] = idlist[0]
|
||||
|
||||
if options.list:
|
||||
client.list_projects()
|
||||
if options.create:
|
||||
client.create_project(options)
|
||||
if options.delete:
|
||||
project = refine.RefineProject(args[0])
|
||||
project.delete()
|
||||
if options.apply:
|
||||
project = refine.RefineProject(args[0])
|
||||
response = project.apply_operations(options.apply)
|
||||
if response != 'ok':
|
||||
print >> sys.stderr, 'Failed to apply %s: %s' \
|
||||
% (options.apply, response)
|
||||
return project
|
||||
if options.export or options.output:
|
||||
project = refine.RefineProject(args[0])
|
||||
client.export_project(project, options)
|
||||
return project
|
||||
if options.info:
|
||||
client.info(args[0])
|
||||
project = refine.RefineProject(args[0])
|
||||
return project
|
||||
from google.refine import __main__
|
||||
|
||||
if __name__ == '__main__':
|
||||
# return project so that it's available interactively, python -i refine.py
|
||||
refine_project = main()
|
||||
refine_project = __main__.main()
|
||||
|
|
|
|||
15
setup.py
15
setup.py
|
|
@ -25,23 +25,34 @@ def read(filename):
|
|||
return open(os.path.join(os.path.dirname(__file__), filename)).read()
|
||||
|
||||
setup(name='openrefine-client',
|
||||
version='0.3.4',
|
||||
version='0.3.6',
|
||||
description=('The OpenRefine Python Client Library provides an '
|
||||
'interface to communicating with an OpenRefine server. '
|
||||
'This fork extends the command line interface (CLI).'),
|
||||
long_description=read('README.md'),
|
||||
long_description_content_type='text/markdown',
|
||||
author='Felix Lohmeier',
|
||||
author_email='felix.lohmeier@opencultureconsulting.com',
|
||||
url='https://github.com/opencultureconsulting/openrefine-client',
|
||||
packages=find_packages(exclude=['tests']),
|
||||
install_requires=['urllib2_file'],
|
||||
python_requires='>2.6, !=3.*',
|
||||
entry_points={
|
||||
'console_scripts': [ 'openrefine-client = google.refine.__main__:main' ]
|
||||
},
|
||||
platforms=['Any'],
|
||||
keywords='openrefine client batch processing docker etl code4lib',
|
||||
classifiers = [
|
||||
'Development Status :: 3 - Alpha',
|
||||
'Development Status :: 4 - Beta',
|
||||
'Environment :: Console (Text Based)',
|
||||
'Intended Audience :: Developers',
|
||||
'Intended Audience :: System Administrators',
|
||||
'License :: OSI Approved :: GNU General Public License (GPL)',
|
||||
'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)',
|
||||
'Operating System :: OS Independent',
|
||||
'Programming Language :: Python',
|
||||
'Programming Language :: Python :: 2',
|
||||
'Programming Language :: Python :: 2.7',
|
||||
'Topic :: Software Development :: Libraries :: Python Modules',
|
||||
'Topic :: Text Processing',
|
||||
],
|
||||
|
|
|
|||
Loading…
Reference in New Issue