Add CSV bulk import command
This commit is contained in:
parent
29544f7eaa
commit
7188f37c9f
4
bin/cli
4
bin/cli
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@ -27,7 +27,7 @@ use Doctrine\ORM\Tools\Console\ConsoleRunner;
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use Doctrine\ORM\Tools\Console\EntityManagerProvider\SingleManagerProvider;
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use Exception;
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use OCC\OaiPmh2\Console\AddRecordCommand;
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use OCC\OaiPmh2\Console\BulkUpdateCommand;
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use OCC\OaiPmh2\Console\CsvImportCommand;
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use OCC\OaiPmh2\Console\DeleteRecordCommand;
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use OCC\OaiPmh2\Console\PruneRecordsCommand;
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use OCC\OaiPmh2\Console\PruneResumptionTokensCommand;
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@ -37,7 +37,7 @@ require __DIR__ . '/../vendor/autoload.php';
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$commands = [
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new AddRecordCommand(),
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new BulkUpdateCommand(),
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new CsvImportCommand(),
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new DeleteRecordCommand(),
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new PruneRecordsCommand(),
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new PruneResumptionTokensCommand(),
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@ -38,14 +38,13 @@
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"symfony/cache": "^6.4",
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"symfony/console": "^6.4",
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"symfony/filesystem": "^6.4",
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"symfony/serializer":"^6.4",
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"symfony/validator": "^6.4",
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"symfony/yaml": "^6.4"
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},
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"require-dev": {
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"phpstan/phpstan": "^1.10",
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"phpstan/phpstan-strict-rules": "^1.5",
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"friendsofphp/php-cs-fixer": "^3.45"
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"friendsofphp/php-cs-fixer": "^3.46"
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},
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"autoload": {
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"psr-4": {
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@ -4,7 +4,7 @@
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"Read more about it at https://getcomposer.org/doc/01-basic-usage.md#installing-dependencies",
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"This file is @generated automatically"
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],
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"content-hash": "816dd79b521706bbb444b1dbf37d384c",
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"content-hash": "944cba5f372ca0ab2482551434ec9d4a",
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"packages": [
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{
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"name": "doctrine/cache",
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@ -2611,104 +2611,6 @@
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],
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"time": "2023-08-16T06:22:46+00:00"
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},
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{
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"name": "symfony/serializer",
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"version": "v6.4.2",
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"source": {
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"type": "git",
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"url": "https://github.com/symfony/serializer.git",
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"reference": "f87ea9d7bfd4cf2f7b72be554607e6c96e6664af"
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},
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"dist": {
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"type": "zip",
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"url": "https://api.github.com/repos/symfony/serializer/zipball/f87ea9d7bfd4cf2f7b72be554607e6c96e6664af",
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"reference": "f87ea9d7bfd4cf2f7b72be554607e6c96e6664af",
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"shasum": ""
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},
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"require": {
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"php": ">=8.1",
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"symfony/deprecation-contracts": "^2.5|^3",
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"symfony/polyfill-ctype": "~1.8"
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},
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"conflict": {
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"doctrine/annotations": "<1.12",
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"phpdocumentor/reflection-docblock": "<3.2.2",
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"phpdocumentor/type-resolver": "<1.4.0",
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"symfony/dependency-injection": "<5.4",
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"symfony/property-access": "<5.4",
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"symfony/property-info": "<5.4.24|>=6,<6.2.11",
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"symfony/uid": "<5.4",
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"symfony/validator": "<6.4",
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"symfony/yaml": "<5.4"
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},
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"require-dev": {
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"doctrine/annotations": "^1.12|^2",
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"phpdocumentor/reflection-docblock": "^3.2|^4.0|^5.0",
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"seld/jsonlint": "^1.10",
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"symfony/cache": "^5.4|^6.0|^7.0",
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"symfony/config": "^5.4|^6.0|^7.0",
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"symfony/console": "^5.4|^6.0|^7.0",
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"symfony/dependency-injection": "^5.4|^6.0|^7.0",
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"symfony/error-handler": "^5.4|^6.0|^7.0",
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"symfony/filesystem": "^5.4|^6.0|^7.0",
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"symfony/form": "^5.4|^6.0|^7.0",
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"symfony/http-foundation": "^5.4|^6.0|^7.0",
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"symfony/http-kernel": "^5.4|^6.0|^7.0",
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"symfony/messenger": "^5.4|^6.0|^7.0",
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"symfony/mime": "^5.4|^6.0|^7.0",
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"symfony/property-access": "^5.4|^6.0|^7.0",
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"symfony/property-info": "^5.4.24|^6.2.11|^7.0",
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"symfony/translation-contracts": "^2.5|^3",
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"symfony/uid": "^5.4|^6.0|^7.0",
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"symfony/validator": "^6.4|^7.0",
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"symfony/var-dumper": "^5.4|^6.0|^7.0",
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"symfony/var-exporter": "^5.4|^6.0|^7.0",
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"symfony/yaml": "^5.4|^6.0|^7.0"
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},
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"type": "library",
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"autoload": {
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"psr-4": {
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"Symfony\\Component\\Serializer\\": ""
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},
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"exclude-from-classmap": [
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"/Tests/"
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]
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},
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"notification-url": "https://packagist.org/downloads/",
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"license": [
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"MIT"
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],
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"authors": [
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{
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"name": "Fabien Potencier",
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"email": "fabien@symfony.com"
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},
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{
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"name": "Symfony Community",
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"homepage": "https://symfony.com/contributors"
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}
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],
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"description": "Handles serializing and deserializing data structures, including object graphs, into array structures or other formats like XML and JSON.",
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"homepage": "https://symfony.com",
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"support": {
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"source": "https://github.com/symfony/serializer/tree/v6.4.2"
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},
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"funding": [
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{
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"url": "https://symfony.com/sponsor",
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"type": "custom"
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},
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{
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"url": "https://github.com/fabpot",
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"type": "github"
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},
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{
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"url": "https://tidelift.com/funding/github/packagist/symfony/symfony",
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"type": "tidelift"
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}
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],
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"time": "2023-12-29T15:34:34+00:00"
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},
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{
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"name": "symfony/service-contracts",
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"version": "v3.4.1",
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@ -3420,21 +3322,22 @@
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},
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{
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"name": "friendsofphp/php-cs-fixer",
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"version": "v3.45.0",
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"version": "v3.46.0",
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"source": {
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"type": "git",
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"url": "https://github.com/PHP-CS-Fixer/PHP-CS-Fixer.git",
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"reference": "c0daa33cb2533cd73f48dde1c70c2afa3e7953b5"
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"reference": "be6831c9af1740470d2a773119b9273f8ac1c3d2"
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},
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"dist": {
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"type": "zip",
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"url": "https://api.github.com/repos/PHP-CS-Fixer/PHP-CS-Fixer/zipball/c0daa33cb2533cd73f48dde1c70c2afa3e7953b5",
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"reference": "c0daa33cb2533cd73f48dde1c70c2afa3e7953b5",
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"url": "https://api.github.com/repos/PHP-CS-Fixer/PHP-CS-Fixer/zipball/be6831c9af1740470d2a773119b9273f8ac1c3d2",
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"reference": "be6831c9af1740470d2a773119b9273f8ac1c3d2",
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"shasum": ""
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},
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"require": {
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"composer/semver": "^3.4",
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"composer/xdebug-handler": "^3.0.3",
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"ext-filter": "*",
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"ext-json": "*",
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"ext-tokenizer": "*",
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"php": "^7.4 || ^8.0",
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@ -3498,7 +3401,7 @@
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],
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"support": {
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"issues": "https://github.com/PHP-CS-Fixer/PHP-CS-Fixer/issues",
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"source": "https://github.com/PHP-CS-Fixer/PHP-CS-Fixer/tree/v3.45.0"
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"source": "https://github.com/PHP-CS-Fixer/PHP-CS-Fixer/tree/v3.46.0"
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},
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"funding": [
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{
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@ -3506,7 +3409,7 @@
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"type": "github"
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}
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],
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"time": "2023-12-30T02:07:07+00:00"
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"time": "2024-01-03T21:38:46+00:00"
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},
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{
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"name": "phpstan/phpstan",
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@ -22,6 +22,7 @@ declare(strict_types=1);
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namespace OCC\OaiPmh2\Console;
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use OCC\OaiPmh2\Database;
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use Symfony\Component\Console\Attribute\AsCommand;
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use Symfony\Component\Console\Command\Command;
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use Symfony\Component\Console\Input\InputInterface;
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@ -41,6 +42,7 @@ class AddRecordCommand extends Command
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{
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protected function execute(InputInterface $input, OutputInterface $output): int
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{
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Database::getInstance()->pruneOrphanSets();
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return Command::SUCCESS;
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}
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}
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@ -1,48 +0,0 @@
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<?php
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/**
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* OAI-PMH 2.0 Data Provider
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* Copyright (C) 2023 Sebastian Meyer <sebastian.meyer@opencultureconsulting.com>
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*
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* This program is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program. If not, see <http://www.gnu.org/licenses/>.
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*/
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declare(strict_types=1);
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namespace OCC\OaiPmh2\Console;
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use Symfony\Component\Console\Attribute\AsCommand;
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use Symfony\Component\Console\Command\Command;
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use Symfony\Component\Console\Input\InputInterface;
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use Symfony\Component\Console\Output\OutputInterface;
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/**
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* Update records in database from CSV file.
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*
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* @author Sebastian Meyer <sebastian.meyer@opencultureconsulting.com>
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* @package opencultureconsulting/oai-pmh2
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*/
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#[AsCommand(
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name: 'oai:records:bulk-update',
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description: 'Update records in database from CSV file'
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)]
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class BulkUpdateCommand extends Command
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{
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protected function execute(InputInterface $input, OutputInterface $output): int
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{
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// https://symfony.com/doc/current/console/input.html
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// https://symfony.com/doc/current/components/serializer.html#the-csvencoder
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return Command::SUCCESS;
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}
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}
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@ -0,0 +1,175 @@
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<?php
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/**
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* OAI-PMH 2.0 Data Provider
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* Copyright (C) 2023 Sebastian Meyer <sebastian.meyer@opencultureconsulting.com>
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*
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* This program is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program. If not, see <http://www.gnu.org/licenses/>.
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*/
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declare(strict_types=1);
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namespace OCC\OaiPmh2\Console;
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use DateTime;
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use OCC\OaiPmh2\Database;
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use OCC\OaiPmh2\Database\Record;
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use Symfony\Component\Console\Attribute\AsCommand;
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use Symfony\Component\Console\Command\Command;
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use Symfony\Component\Console\Input\InputArgument;
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use Symfony\Component\Console\Input\InputInterface;
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use Symfony\Component\Console\Input\InputOption;
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use Symfony\Component\Console\Output\OutputInterface;
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/**
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* Import records into database from a CSV file.
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*
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* @author Sebastian Meyer <sebastian.meyer@opencultureconsulting.com>
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* @package opencultureconsulting/oai-pmh2
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*/
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#[AsCommand(
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name: 'oai:records:import:csv',
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description: 'Import records from a CSV file'
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)]
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class CsvImportCommand extends Command
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{
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protected function configure(): void
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{
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$this->addArgument(
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'format',
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InputArgument::REQUIRED,
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'The format (metadata prefix) of the records.',
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null,
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function (): array {
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return array_keys(Database::getInstance()->getMetadataFormats()->getQueryResult());
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}
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);
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$this->addArgument(
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'file',
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InputArgument::REQUIRED,
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'The CSV file containing the records.'
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);
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$this->addOption(
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'idColumn',
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null,
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InputOption::VALUE_OPTIONAL,
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'Name of the CSV column which holds the records\' identifier.',
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'identifier'
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);
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$this->addOption(
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'contentColumn',
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null,
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InputOption::VALUE_OPTIONAL,
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'Name of the CSV column which holds the records\' content.',
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'content'
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);
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$this->addOption(
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'dateColumn',
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null,
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InputOption::VALUE_OPTIONAL,
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'Name of the CSV column which holds the records\' datetime of last change.',
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'lastChanged'
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);
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$this->addOption(
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'setColumn',
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null,
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InputOption::VALUE_OPTIONAL,
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'Name of the CSV column which holds the records\' sets list.',
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'sets'
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);
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parent::configure();
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}
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protected function execute(InputInterface $input, OutputInterface $output): int
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{
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/** @var array<string, string> */
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$arguments = $input->getArguments();
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/** @var array<string, string> */
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$options = $input->getOptions();
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$formats = Database::getInstance()->getMetadataFormats()->getQueryResult();
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if (!in_array($arguments['format'], array_keys($formats), true)) {
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// Error: Invalid metadata prefix
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echo 1;
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return Command::INVALID;
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}
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$file = fopen($arguments['file'], 'r');
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if ($file === false) {
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// Error: File not found or not readable
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echo 2;
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return Command::INVALID;
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}
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$headers = fgetcsv($file);
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if (!is_array($headers)) {
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// Error: No CSV
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echo 3;
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return Command::INVALID;
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} else {
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$headers = array_flip($headers);
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}
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$column = [];
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foreach ($options as $option => $value) {
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if (isset($headers[$value])) {
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$column[$option] = $headers[$value];
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}
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}
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if (!isset($column['idColumn']) || !isset($column['contentColumn'])) {
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// Error: Required columns missing
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echo 4;
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return Command::INVALID;
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}
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$lastChanged = new DateTime();
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$count = 0;
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while ($record = fgetcsv($file)) {
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$identifier = $record[$column['idColumn']];
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$content = $record[$column['contentColumn']];
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if ($content === '') {
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$content = null;
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}
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if (isset($column['dateColumn'])) {
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$lastChanged = new DateTime($record[$column['dateColumn']]);
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}
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// TODO: Complete support for sets.
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$sets = null;
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Database::getInstance()->addOrUpdateRecord(
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$identifier,
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$arguments['format'],
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$content,
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$lastChanged,
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$sets,
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true
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);
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++$count;
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if ($count % 500 === 0) {
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Database::getInstance()->flush(true);
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}
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}
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Database::getInstance()->flush(true);
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$output->writeln([
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'',
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sprintf(
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' [OK] %d records with metadata prefix "%s" were imported successfully! ',
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$count,
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$arguments['format']
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),
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''
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]);
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return Command::SUCCESS;
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}
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}
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|
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@ -22,6 +22,8 @@ declare(strict_types=1);
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|
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namespace OCC\OaiPmh2\Console;
|
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|
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use OCC\OaiPmh2\Configuration;
|
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use OCC\OaiPmh2\Database;
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use Symfony\Component\Console\Attribute\AsCommand;
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use Symfony\Component\Console\Command\Command;
|
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use Symfony\Component\Console\Input\InputInterface;
|
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|
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@ -41,6 +43,8 @@ class DeleteRecordCommand extends Command
|
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{
|
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protected function execute(InputInterface $input, OutputInterface $output): int
|
||||
{
|
||||
$policy = Configuration::getInstance()->deletedRecords;
|
||||
Database::getInstance()->pruneOrphanSets();
|
||||
return Command::SUCCESS;
|
||||
}
|
||||
}
|
||||
|
|
|
|||
|
|
@ -102,6 +102,68 @@ class Database
|
|||
$this->entityManager->flush();
|
||||
}
|
||||
|
||||
/**
|
||||
* Add or update record.
|
||||
*
|
||||
* @param string $identifier The record identifier
|
||||
* @param Format|string $format The metadata prefix
|
||||
* @param ?string $data The record's content
|
||||
* @param ?DateTime $lastChanged The date of last change
|
||||
* @param ?array<string, Set> $sets The record's associated sets
|
||||
* @param bool $bulkMode Should we operate in bulk mode (no flush)?
|
||||
*
|
||||
* @return void
|
||||
*/
|
||||
public function addOrUpdateRecord(
|
||||
string $identifier,
|
||||
Format|string $format,
|
||||
?string $data = null,
|
||||
?DateTime $lastChanged = null,
|
||||
// TODO: Complete support for sets
|
||||
?array $sets,
|
||||
bool $bulkMode = false
|
||||
): void
|
||||
{
|
||||
if (!$format instanceof Format) {
|
||||
/** @var Format */
|
||||
$format = $this->entityManager->getReference(Format::class, $format);
|
||||
}
|
||||
$record = $this->entityManager->find(Record::class, ['identifier' => $identifier, 'format' => $format]);
|
||||
if (isset($record)) {
|
||||
try {
|
||||
$record->setContent($data);
|
||||
$record->setLastChanged($lastChanged);
|
||||
} catch (ValidationFailedException $exception) {
|
||||
throw $exception;
|
||||
}
|
||||
} else {
|
||||
try {
|
||||
$record = new Record($identifier, $format, $data, $lastChanged);
|
||||
} catch (ValidationFailedException $exception) {
|
||||
throw $exception;
|
||||
}
|
||||
}
|
||||
$this->entityManager->persist($record);
|
||||
if (!$bulkMode) {
|
||||
$this->entityManager->flush();
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Flush all changes to the database.
|
||||
*
|
||||
* @param bool $clear Also clear the entity manager?
|
||||
*
|
||||
* @return void
|
||||
*/
|
||||
public function flush(bool $clear = false): void
|
||||
{
|
||||
$this->entityManager->flush();
|
||||
if ($clear) {
|
||||
$this->entityManager->clear();
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Get the earliest datestamp of any record.
|
||||
*
|
||||
|
|
|
|||
|
|
@ -63,7 +63,7 @@ class Format
|
|||
*
|
||||
* @var Collection<int, Record>
|
||||
*/
|
||||
#[ORM\OneToMany(targetEntity: Record::class, mappedBy: 'format', fetch: 'EXTRA_LAZY', orphanRemoval: true)]
|
||||
#[ORM\OneToMany(targetEntity: Record::class, mappedBy: 'format', fetch: 'EXTRA_LAZY', cascade: ['persist'], orphanRemoval: true)]
|
||||
private Collection $records;
|
||||
|
||||
/**
|
||||
|
|
|
|||
|
|
@ -51,7 +51,7 @@ class Record
|
|||
* The associated format.
|
||||
*/
|
||||
#[ORM\Id]
|
||||
#[ORM\ManyToOne(targetEntity: Format::class, inversedBy: 'records')]
|
||||
#[ORM\ManyToOne(targetEntity: Format::class, inversedBy: 'records', cascade: ['persist'])]
|
||||
#[ORM\JoinColumn(name: 'format', referencedColumnName: 'prefix')]
|
||||
private Format $format;
|
||||
|
||||
|
|
@ -185,7 +185,7 @@ class Record
|
|||
{
|
||||
if (isset($data)) {
|
||||
$data = trim($data);
|
||||
if ($validate && $data !== '') {
|
||||
if ($validate) {
|
||||
try {
|
||||
$data = $this->validate($data);
|
||||
} catch (ValidationFailedException $exception) {
|
||||
|
|
@ -236,7 +236,13 @@ class Record
|
|||
protected function validate(string $xml): string
|
||||
{
|
||||
$validator = Validation::createValidator();
|
||||
$violations = $validator->validate($xml, new Assert\Type('string'));
|
||||
$violations = $validator->validate(
|
||||
$xml,
|
||||
[
|
||||
new Assert\Type('string'),
|
||||
new Assert\NotBlank()
|
||||
]
|
||||
);
|
||||
if ($violations->count() > 0) {
|
||||
throw new ValidationFailedException(null, $violations);
|
||||
}
|
||||
|
|
@ -249,18 +255,17 @@ class Record
|
|||
* @param string $identifier The record identifier
|
||||
* @param Format $format The format
|
||||
* @param ?string $data The record's content
|
||||
* @param ?DateTime $lastChanged The date of last change
|
||||
*
|
||||
* @throws ValidationFailedException
|
||||
*/
|
||||
public function __construct(string $identifier, Format $format, ?string $data = null)
|
||||
public function __construct(string $identifier, Format $format, ?string $data = null, ?DateTime $lastChanged = null)
|
||||
{
|
||||
try {
|
||||
$this->identifier = $identifier;
|
||||
$this->setFormat($format);
|
||||
if (isset($data)) {
|
||||
$this->setContent($data);
|
||||
}
|
||||
$this->setLastChanged();
|
||||
$this->setContent($data);
|
||||
$this->setLastChanged($lastChanged);
|
||||
$this->sets = new ArrayCollection();
|
||||
} catch (ValidationFailedException $exception) {
|
||||
throw $exception;
|
||||
|
|
|
|||
Loading…
Reference in New Issue